Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vacj family lipoprotein | ALO56_02348 | Q4UND1 | Negative | 3695285 - 3696097 | 30463.3 |
| putative serine protein kinase prka | ALO56_02349 | Not Available | Negative | 3696090 - 3697388 | 48608.0 |
| amino acid abc transporter permease | ALO56_02350 | Not Available | Positive | 3698507 - 3699361 | 30903.3 |
| uncharacterized protein | ALO56_02351 | P0AF54 | Positive | 3699596 - 3699907 | 11394.0 |
| acetate permease | ALO56_100196 | A1JIK1 | Positive | 3699904 - 3701562 | 58846.5 |
| uncharacterized protein | ALO56_02353 | Not Available | Positive | 3702097 - 3702480 | 14178.9 |
| short chain dehydrogenase | ALO56_02354 | P66778 | Positive | 3702584 - 3703396 | 29626.9 |
| carbon storage regulator -like protein | ALO56_02355 | Q886F0 | Positive | 3703570 - 3703767 | 7082.6 |
| uncharacterized protein | ALO56_02356 | Q886E9 | Negative | 3703771 - 3703998 | 8764.46 |
| glutamyl aminopeptidase clan mh | ALO56_02357 | O07603 | Negative | 3704273 - 3705469 | 43012.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









