Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter permease | ALO56_02337 | Not Available | Negative | 3683756 - 3684598 | 31131.5 |
| uncharacterized protein | ALO56_02338 | Not Available | Negative | 3684595 - 3685407 | 30327.0 |
| transcriptional regulator gntr | ALO56_02339 | Q57SD4 | Positive | 3686925 - 3687644 | 27356.3 |
| putative m18 family aminopeptidase 2 | ALO56_04858 | Q87YC5 | Negative | 3687700 - 3689001 | 47325.2 |
| pseudouridine synthase | ALO56_02341 | Q8ZIK1 | Negative | 3689173 - 3689838 | 25053.2 |
| cell division topological specificity factor | ALO56_02342 | Q48L75 | Negative | 3689899 - 3690153 | 9703.62 |
| site-determining protein | ALO56_02343 | P0AEZ5 | Negative | 3690153 - 3690965 | 29381.5 |
| lipid a biosynthesis lauroyl acyltransferase | ALO56_04860 | P0ACV1 | Positive | 3691326 - 3692990 | 63620.7 |
| patatin family protein | ALO56_02346 | Not Available | Positive | 3693023 - 3694207 | 42170.9 |
| pirin | ALO56_02347 | Not Available | Negative | 3694224 - 3695090 | 32100.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









