Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl- synthase ii | ALO56_01220 | Not Available | Positive | 309272 - 310498 | 43827.1 |
| lysr family transcriptional regulator | ALO56_01221 | P77559 | Negative | 310646 - 311530 | 32236.1 |
| major facilitator superfamily protein | ALO56_01222 | P43531 | Positive | 311642 - 312916 | 45183.3 |
| putative aminopeptidase | ALO56_100286 | Not Available | Negative | 313162 - 314232 | 40767.7 |
| lipoprotein | ALO56_03177 | Not Available | Positive | 314299 - 314724 | 15854.8 |
| uncharacterized protein | ALO56_03178 | Not Available | Negative | 314725 - 314958 | 8506.13 |
| osmotically inducible protein | ALO56_03179 | P0C0L2 | Negative | 315109 - 315540 | 14891.8 |
| luciferase family protein | ALO56_03180 | O32254 | Positive | 315755 - 316756 | 36577.0 |
| uncharacterized protein | ALO56_03181 | Not Available | Negative | 316890 - 317114 | 7607.36 |
| uncharacterized protein | ALO56_03182 | Not Available | Negative | 317262 - 317480 | 8145.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









