Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase | ALO56_100650 | Not Available | Positive | 3658310 - 3659602 | 47033.7 |
| acetylornithine deacetylase | ALO56_04312 | Q9CLT9 | Positive | 3659599 - 3660756 | 42194.8 |
| succinate-semialdehyde dehydrogenase | ALO56_04313 | Not Available | Positive | 3660877 - 3662334 | 51984.7 |
| glutamine synthetase | ALO56_04314 | Not Available | Negative | 3662420 - 3663796 | 51026.6 |
| glutamine synthetase | ALO56_04315 | P78061 | Positive | 3664390 - 3665748 | 51121.0 |
| aminotransferase | ALO56_04316 | Q9I6J2 | Positive | 3665818 - 3667185 | 50259.4 |
| putrescine-binding periplasmic protein | ALO56_04317 | Q02UB7 | Positive | 3667439 - 3668548 | 40204.4 |
| putrescine-binding periplasmic protein | ALO56_04318 | Not Available | Positive | 3668720 - 3669814 | 39763.4 |
| spermidine/putrescine abc transporter atpase | ALO56_04319 | P31134 | Positive | 3669871 - 3671013 | 42445.4 |
| putrescine abc transporter permease | ALO56_04320 | P31135 | Positive | 3671010 - 3671930 | 34267.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









