Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1 rna-binding domain-containing protein | ALO56_04293 | P46837 | Negative | 3634218 - 3636539 | 84611.3 |
| osmolarity response regulator | ALO56_04294 | P0AA18 | Positive | 3636839 - 3637579 | 27321.0 |
| osmolarity sensor protein envz | ALO56_04295 | P0AEJ4 | Positive | 3637743 - 3639053 | 48672.9 |
| putative alpha-l-glutamate ligase | ALO56_04296 | Q48BZ2 | Negative | 3639112 - 3640017 | 32681.2 |
| uncharacterized protein | ALO56_04297 | A8H4D4 | Negative | 3640014 - 3640490 | 17432.2 |
| diguanylate phosphodiesterase | ALO56_04298 | P37649 | Negative | 3640507 - 3641289 | 29119.6 |
| heat shock protein 15 | ALO56_04299 | P44754 | Positive | 3641469 - 3641876 | 15493.5 |
| 33 kda chaperonin | ALO56_04300 | Q88AZ5 | Positive | 3642050 - 3642952 | 33223.5 |
| phosphoenolpyruvate carboxykinase | ALO56_04301 | Q500D1 | Positive | 3643132 - 3644673 | 55734.9 |
| acetyltransferase | ALO56_04302 | Not Available | Positive | 3644803 - 3645303 | 18613.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









