Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate binding protein | ALO56_03169 | Q02DZ3 | Positive | 3616925 - 3617923 | 34892.7 |
| phosphate abc transporter permease | ALO56_03170 | P0A629 | Positive | 3618056 - 3620347 | 83918.7 |
| binding-protein dependent transport system inner membrane protein | ALO56_03171 | P9WG10 | Positive | 3620363 - 3622033 | 60784.4 |
| phosphate import atp-binding protein pstb | ALO56_03172 | Q48BP8 | Positive | 3622104 - 3622937 | 31188.7 |
| phosphate-specific transport system accessory protein phou | ALO56_03173 | Q9Z410 | Positive | 3623008 - 3623772 | 28954.6 |
| response regulator | ALO56_03174 | Not Available | Positive | 3623977 - 3624873 | 32251.9 |
| uncharacterized protein | ALO56_03175 | Not Available | Positive | 3625312 - 3630543 | 191102.0 |
| m24/m37 family peptidase | ALO56_03176 | Not Available | Positive | 3630658 - 3631584 | 33442.4 |
| glutamate--cysteine ligase | ALO56_100249 | Q88AR1 | Negative | 3632000 - 3633604 | 60249.2 |
| thioesterase | ALO56_04292 | Not Available | Negative | 3633835 - 3634218 | 13722.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









