Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate ammonia-lyase | ALO56_04999 | P07346 | Negative | 3607179 - 3608606 | 51331.3 |
| lysr family transcriptional regulator | ALO56_100407 | Not Available | Positive | 3608721 - 3609794 | 39099.6 |
| uncharacterized protein | ALO56_03161 | Not Available | Negative | 3609835 - 3610470 | 24316.2 |
| n5-carboxyaminoimidazole ribonucleotide mutase | ALO56_03162 | P72157 | Positive | 3610834 - 3611325 | 16881.6 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | ALO56_03163 | P72158 | Positive | 3611335 - 3612417 | 38775.3 |
| uncharacterized protein | ALO56_03164 | Not Available | Positive | 3612756 - 3613001 | 8283.68 |
| uncharacterized protein | ALO56_03165 | Not Available | Positive | 3613085 - 3613618 | 19388.7 |
| aldose 1-epimerase | ALO56_03166 | Not Available | Negative | 3613631 - 3614542 | 33986.1 |
| cytosolic long-chain acyl-coa thioester hydrolase family protein | ALO56_03167 | P0A1A2 | Negative | 3614652 - 3615053 | 14522.5 |
| major facilitator family transporter | ALO56_03168 | Q9KWK6 | Positive | 3615482 - 3616771 | 46048.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









