Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate carboxylase subunit a | ALO56_03151 | D3DJ42 | Positive | 3595183 - 3596625 | 52981.7 |
| pyruvate carboxylase subunit b | ALO56_03152 | Q58628 | Positive | 3596637 - 3598445 | 65753.3 |
| acetyltransferase | ALO56_03153 | Not Available | Negative | 3598642 - 3599313 | 25308.9 |
| gnat family acetyltransferase | ALO56_03154 | Not Available | Negative | 3599326 - 3599772 | 17078.2 |
| negative transcriptional regulator | ALO56_101459 | P21341 | Negative | 3599772 - 3600512 | 27542.7 |
| gntr family transcriptional regulator | ALO56_03155 | P49309 | Positive | 3600501 - 3602063 | 56605.8 |
| uncharacterized protein | ALO56_03156 | P31064 | Positive | 3602117 - 3603328 | 41917.0 |
| effector locus protein | ALO56_03157 | Q8XTY1 | Positive | 3603454 - 3604344 | 33317.6 |
| l-asparaginase i | ALO56_03158 | P0A963 | Negative | 3604412 - 3605416 | 35180.3 |
| sodium/alanine transporter | ALO56_03159 | O31464 | Negative | 3605444 - 3606895 | 51862.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









