Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrpg protein | ALO56_02432 | Not Available | Positive | 293695 - 294105 | 14871.9 |
| type iii chaperone shce | ALO56_02433 | Not Available | Positive | 296867 - 297265 | 14606.5 |
| lysophospholipid acyltransferase | ALO56_101213 | Not Available | Positive | 298233 - 298409 | 7187.32 |
| histidine ammonia-lyase | ALO56_01216 | Q8RBH4 | Positive | 298390 - 299937 | 56035.3 |
| membrane protein, exporter | ALO56_100259 | Not Available | Positive | 300947 - 303289 | 84094.4 |
| membrane protein | ALO56_01217 | Not Available | Positive | 303286 - 304458 | 43214.8 |
| fad-binding monooxygenase | ALO56_01218 | Q0VZ69 | Positive | 304445 - 305692 | 45996.4 |
| sam-dependent methyltransferase | ALO56_100095 | Not Available | Positive | 305689 - 306423 | 27807.3 |
| 3-oxoacyl- synthase | ALO56_100199 | P0AAI7 | Positive | 306899 - 308095 | 41607.3 |
| uncharacterized protein | ALO56_01219 | Not Available | Positive | 308092 - 308547 | 16056.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









