Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m16 family protein | ALO56_01990 | Not Available | Positive | 3553570 - 3554922 | 49881.5 |
| insulinase-like:peptidase m16 | ALO56_01991 | P55680 | Positive | 3554919 - 3556382 | 51743.2 |
| ribosomal rna small subunit methyltransferase d | ALO56_01992 | P0ADY0 | Positive | 3556382 - 3556966 | 21152.1 |
| putative proteic killer protein | ALO56_100480 | Q7A225 | Positive | 3557379 - 3557558 | 6818.1 |
| virulence-associated protein | ALO56_04789 | Not Available | Positive | 3557571 - 3557858 | 10693.8 |
| uncharacterized protein | ALO56_01993 | P45524 | Positive | 3557984 - 3559030 | 38747.9 |
| rhodanese domain-containing protein | ALO56_01994 | Q9I452 | Negative | 3559041 - 3559898 | 30744.4 |
| regulatory protein, tetr | ALO56_01995 | Not Available | Negative | 3559949 - 3560611 | 25562.8 |
| aldehyde dehydrogenase | ALO56_01996 | Q9I6C8 | Positive | 3560776 - 3562203 | 53062.2 |
| phosphopantetheine adenylyltransferase | ALO56_01997 | Q4ZM37 | Positive | 3562363 - 3562842 | 17856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









