Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggt family protein | ALO56_01972 | P25254 | Positive | 3536426 - 3537019 | 21663.1 |
| homoserine o-acetyltransferase | ALO56_01973 | Q87V90 | Positive | 3537227 - 3538366 | 41719.4 |
| methionine biosynthesis metw | ALO56_01974 | Q7UG04 | Positive | 3538374 - 3538994 | 23576.1 |
| uncharacterized protein | ALO56_01975 | Not Available | Positive | 3539017 - 3539451 | 15922.1 |
| non-canonical purine ntp pyrophosphatase | ALO56_01976 | Q87V88 | Positive | 3539448 - 3540044 | 21312.5 |
| hemn family oxidoreductase | ALO56_100066 | P52062 | Positive | 3540041 - 3541255 | 45190.8 |
| uncharacterized protein | ALO56_01977 | Not Available | Positive | 3541265 - 3541588 | 11453.5 |
| trna -methyltransferase | ALO56_04786 | Q88AF5 | Negative | 3541751 - 3542827 | 40328.8 |
| thiazole synthase | ALO56_01979 | Q48CL9 | Negative | 3542497 - 3543291 | 28312.7 |
| sulfur carrier protein this | ALO56_01980 | Q2W3R9 | Negative | 3543346 - 3543546 | 7061.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









