Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_01963 | Q48P90 | Positive | 3528354 - 3528926 | 20434.3 |
| putative holliday junction resolvase | ALO56_01964 | Q4ZZ68 | Positive | 3528926 - 3529366 | 15981.2 |
| bifunctional protein pyrr | ALO56_01965 | Q4ZZ69 | Positive | 3529464 - 3529976 | 18538.4 |
| aspartate carbamoyltransferase | ALO56_01966 | Q48P93 | Positive | 3529989 - 3530993 | 36399.3 |
| dihydroorotase | ALO56_100101 | Q59712 | Positive | 3530990 - 3532261 | 44115.9 |
| uncharacterized protein | ALO56_01967 | Q54KZ0 | Negative | 3532389 - 3532793 | 15435.9 |
| nlp/p60-like protein-like protein | ALO56_01968 | Not Available | Positive | 3533044 - 3533727 | 25209.3 |
| twitching motility protein | ALO56_01969 | P24559 | Negative | 3533785 - 3534819 | 37892.1 |
| uncharacterized protein | ALO56_01970 | P24562 | Positive | 3534875 - 3535561 | 24429.2 |
| pyrroline-5-carboxylate reductase | ALO56_01971 | P22008 | Positive | 3535584 - 3536402 | 28073.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









