Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01953 | P77338 | Positive | 3510740 - 3514126 | 125778.0 |
| hypothetical protein | ALO56_01954 | Q4ZZ58 | Positive | 3514175 - 3515650 | 55848.9 |
| chemotaxis protein chew | ALO56_01955 | Not Available | Negative | 3515784 - 3516272 | 17434.0 |
| sensor histidine kinase/response regulator | ALO56_01956 | Not Available | Negative | 3516265 - 3522246 | 220386.0 |
| type iv pilus bioproteinsis protein pilj | ALO56_01957 | P42257 | Negative | 3522294 - 3524336 | 73264.7 |
| chew-like protein | ALO56_01958 | P43502 | Negative | 3524415 - 3524954 | 20226.6 |
| type iv pilus response regulator pilh | ALO56_01959 | P43501 | Negative | 3524969 - 3525334 | 13313.2 |
| response regulator receiver | ALO56_01960 | P46384 | Negative | 3525382 - 3525792 | 15094.5 |
| glutathione synthetase | ALO56_01961 | Q87VA4 | Positive | 3526026 - 3526985 | 35268.7 |
| uncharacterized protein | ALO56_01962 | Not Available | Positive | 3527374 - 3528276 | 33169.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









