Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01351 | Not Available | Negative | 3480361 - 3480945 | 21850.8 |
| uncharacterized protein | ALO56_01352 | Not Available | Negative | 3480911 - 3481663 | 28698.6 |
| hypothetical protein | ALO56_100946 | Not Available | Positive | 3481735 - 3481929 | 6959.87 |
| cytochrome c oxidase subunit iii | ALO56_01353 | Q4JQI1 | Negative | 3482071 - 3482961 | 33800.5 |
| cytochrome c oxidase assembly protein | ALO56_01354 | Q5LNX9 | Negative | 3482963 - 3483547 | 21855.8 |
| cytochrome c oxidase subunit i | ALO56_01355 | P31833 | Negative | 3483549 - 3485159 | 59469.9 |
| atp-dependent rna helicase dbpa | ALO56_01940 | P21693 | Positive | 3485536 - 3486915 | 49929.8 |
| uncharacterized protein | ALO56_01941 | P37631 | Positive | 3486928 - 3488211 | 46284.5 |
| uncharacterized protein | ALO56_01942 | P75870 | Positive | 3488326 - 3490524 | 81444.2 |
| gnat family acetyltransferase | ALO56_01943 | P0AEH3 | Positive | 3491534 - 3491992 | 17433.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









