Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc import atp-binding protein znuc | ALO56_01342 | Q87UN0 | Positive | 3470160 - 3470957 | 28854.9 |
| zinc transporter | ALO56_100143 | P39832 | Positive | 3470893 - 3471738 | 29525.7 |
| lipoprotein | ALO56_01343 | Not Available | Positive | 3471777 - 3472493 | 25838.2 |
| catalase | ALO56_04616 | P95539 | Negative | 3472639 - 3474789 | 78765.8 |
| methionine import atp-binding protein metn | ALO56_01345 | Q87UN4 | Positive | 3475004 - 3476104 | 40246.6 |
| d-methionine abc transporter permease | ALO56_01346 | Not Available | Positive | 3476104 - 3476778 | 24251.6 |
| d-methionine-binding lipoprotein metq | ALO56_01347 | Q8Z992 | Positive | 3476831 - 3477604 | 27815.5 |
| sco1/senc family protein | ALO56_01348 | P47206 | Negative | 3477765 - 3478397 | 22869.9 |
| protoheme ix farnesyltransferase | ALO56_01349 | Q4KKL2 | Negative | 3478394 - 3479293 | 33217.9 |
| uncharacterized protein | ALO56_01350 | Not Available | Negative | 3479290 - 3480348 | 37952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









