Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | ALO56_00709 | Not Available | Negative | 3456400 - 3457089 | 24453.5 |
| uncharacterized protein | ALO56_00710 | Not Available | Negative | 3457189 - 3457539 | 13239.4 |
| ethd protein | ALO56_00711 | Not Available | Positive | 3457655 - 3457969 | 11738.1 |
| uncharacterized protein | ALO56_00712 | Not Available | Positive | 3458530 - 3458694 | 5861.46 |
| cytochrome c2 | ALO56_00713 | P00082 | Negative | 3458752 - 3459120 | 13285.0 |
| uncharacterized protein | ALO56_00714 | Not Available | Positive | 3459231 - 3460415 | 43381.3 |
| pyoverdine sidechain peptide synthetase iv, d-asp-l-ser component | ALO56_00774 | Q70LM4 | Positive | 3460774 - 3461547 | 28617.3 |
| pyoverdine sidechain peptide synthetase iv, d-asp-l-ser component | ALO56_04502 | Not Available | Positive | 3461549 - 3468594 | 258984.0 |
| periplasmic solute binding protein | ALO56_01341 | P39172 | Negative | 3468666 - 3469610 | 34100.7 |
| putative zinc uptake regulation protein | ALO56_100071 | P0AC51 | Positive | 3469678 - 3470160 | 17265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









