Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00700 | Not Available | Positive | 3444900 - 3445091 | 6691.69 |
| spermidine synthase | ALO56_00701 | Q884N3 | Positive | 3445290 - 3446150 | 31985.3 |
| membrane protein | ALO56_04488 | P44135 | Positive | 3446418 - 3448511 | 77841.9 |
| uncharacterized protein | ALO56_00702 | Not Available | Positive | 3448699 - 3448956 | 9923.75 |
| uncharacterized protein | ALO56_00703 | Not Available | Positive | 3449198 - 3449539 | 13017.2 |
| uncharacterized protein | ALO56_00704 | Q55587 | Positive | 3450071 - 3451480 | 52510.1 |
| uncharacterized protein | ALO56_00705 | Not Available | Positive | 3451493 - 3452452 | 36093.2 |
| uncharacterized protein | ALO56_00706 | Not Available | Negative | 3453368 - 3453742 | 13548.0 |
| amidotransferase | ALO56_00707 | Q9M0A5 | Positive | 3454428 - 3455156 | 27095.5 |
| magnesium and cobalt transport protein | ALO56_00708 | Q9WZ31 | Negative | 3455301 - 3456272 | 36441.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









