Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | ALO56_00691 | Q884P5 | Positive | 3436735 - 3437826 | 39069.6 |
| transporter | ALO56_00692 | Q47142 | Positive | 3437857 - 3439020 | 42645.1 |
| methylthioribulose-1-phosphate dehydratase | ALO56_00693 | Q884P3 | Positive | 3439017 - 3439631 | 22683.9 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | ALO56_100010 | Q884P2 | Positive | 3439688 - 3440263 | 21410.1 |
| enolase-phosphatase e1 | ALO56_00694 | Q4ZVB8 | Positive | 3440311 - 3440994 | 24711.1 |
| luxr family transcriptional regulator | ALO56_00695 | Q6NCZ5 | Positive | 3441204 - 3441926 | 27153.6 |
| uncharacterized protein | ALO56_00696 | Not Available | Negative | 3442037 - 3442330 | 11090.2 |
| ankyrin domain-containing protein | ALO56_00697 | Q9HYV6 | Positive | 3442646 - 3443188 | 19227.1 |
| uncharacterized protein | ALO56_00698 | Not Available | Positive | 3443281 - 3443808 | 19090.8 |
| zinc uptake regulation protein | ALO56_00699 | Not Available | Negative | 3443809 - 3444735 | 31813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









