Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | ALO56_00682 | Q9X4F7 | Positive | 3429320 - 3429922 | 23001.6 |
| lipoprotein | ALO56_00683 | Not Available | Positive | 3429990 - 3430376 | 14226.1 |
| glutaredoxin | ALO56_00684 | Not Available | Negative | 3430395 - 3430772 | 14191.5 |
| gtp cyclohydrolase 1 | ALO56_00685 | Q884Q3 | Negative | 3430836 - 3431381 | 20142.7 |
| smr domain-containing protein | ALO56_00686 | P44126 | Negative | 3431807 - 3432364 | 20858.2 |
| uncharacterized protein | ALO56_00687 | Not Available | Negative | 3432410 - 3432730 | 11246.0 |
| isochorismatase family protein | ALO56_00688 | Not Available | Negative | 3432869 - 3433459 | 21012.5 |
| 50s ribosomal protein l3 glutamine methyltransferase | ALO56_00689 | Q9I347 | Positive | 3433719 - 3434627 | 34032.2 |
| uncharacterized protein | ALO56_04486 | Not Available | Negative | 3434661 - 3435494 | 31745.1 |
| uncharacterized protein | ALO56_00690 | Not Available | Negative | 3435585 - 3436556 | 34908.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









