Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_00673 | Q884R6 | Negative | 3419073 - 3419354 | 10259.0 |
| exonuclease | ALO56_00674 | Q08I43 | Negative | 3419531 - 3420079 | 21112.3 |
| uncharacterized protein | ALO56_00675 | Not Available | Positive | 3420344 - 3421171 | 31384.5 |
| hypothetical protein | ALO56_101267 | Not Available | Negative | 3421212 - 3421319 | 4169.06 |
| ethanolamine permease | ALO56_00676 | Not Available | Negative | 3421506 - 3422870 | 48101.2 |
| orotidine 5'-phosphate decarboxylase | ALO56_00677 | Q884R0 | Positive | 3423164 - 3423898 | 25978.7 |
| oxidoreductase zinc-binding protein | ALO56_00678 | O34812 | Negative | 3424055 - 3425065 | 36046.8 |
| muramoyltetrapeptide carboxypeptidase | ALO56_00679 | Q9ZBI5 | Positive | 3425293 - 3426228 | 32383.0 |
| benzoate transporter | ALO56_00680 | P76103 | Negative | 3426236 - 3427459 | 42244.9 |
| marr family transcriptional regulator | ALO56_00681 | Not Available | Negative | 3427556 - 3428026 | 17498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









