Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00828 | Not Available | Positive | 3391895 - 3393220 | 48576.8 |
| major facilitator transporter | ALO56_00829 | C6DBD0 | Positive | 3393231 - 3394643 | 50096.9 |
| hypothetical protein | ALO56_200152 | Not Available | Negative | 3394778 - 3395041 | 10091.8 |
| hypothetical protein | ALO56_200109 | Not Available | Negative | 3395383 - 3395612 | 8295.19 |
| hypothetical protein | ALO56_200129 | Not Available | Negative | 3395734 - 3396075 | 12225.2 |
| hypothetical protein | ALO56_200022 | Not Available | Negative | 3396068 - 3396364 | 11385.3 |
| hypothetical protein | ALO56_200052 | P0AC21 | Negative | 3396409 - 3396780 | 14049.0 |
| hypothetical protein | ALO56_200064 | Q887V1 | Negative | 3396783 - 3397343 | 20754.4 |
| hypothetical protein | ALO56_200196 | A6T8N3 | Negative | 3397365 - 3398093 | 26163.5 |
| hypothetical protein | ALO56_200102 | Not Available | Negative | 3398328 - 3398897 | 21269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









