Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase involved in dna repair | ALO56_100239 | Not Available | Negative | 3378308 - 3378604 | 10858.0 |
| methyl-accepting chemotaxis protein | ALO56_00820 | A5W2C8 | Positive | 3378961 - 3380586 | 58650.2 |
| arac family transcriptional regulator | ALO56_00821 | Not Available | Negative | 3380703 - 3381809 | 41115.8 |
| hypothetical protein | ALO56_04516 | Q9L4K3 | Positive | 3382793 - 3383653 | 31550.8 |
| choline abc transporter permease | ALO56_00822 | P46921 | Positive | 3383721 - 3384566 | 30516.5 |
| glycine/betaine/l-proline abc transporter, atp-binding subunit | ALO56_00823 | P14175 | Positive | 3384563 - 3385741 | 43402.8 |
| hth-type transcriptional regulator beti | ALO56_00824 | Q88AF0 | Positive | 3386100 - 3386693 | 21992.6 |
| nad/nadp-dependent betaine aldehyde dehydrogenase | ALO56_00825 | Q88AE9 | Positive | 3386799 - 3388271 | 53239.4 |
| oxygen-dependent choline dehydrogenase | ALO56_00826 | Q88AE7 | Positive | 3388436 - 3390136 | 62592.1 |
| c69 family peptidase | ALO56_00827 | Not Available | Positive | 3390453 - 3391895 | 52203.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









