Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | ALO56_02703 | Not Available | Positive | 3367582 - 3370860 | 123386.0 |
| uncharacterized protein | ALO56_02704 | P9WL97 | Positive | 3370949 - 3373456 | 93101.5 |
| transglutaminase | ALO56_02705 | Not Available | Positive | 3373456 - 3374346 | 33574.0 |
| blue copper domain-containing protein | ALO56_02706 | Q9F646 | Positive | 3374695 - 3375141 | 16035.4 |
| Trna-gly | Not Available | Not Available | Positive | 3375317 - 3375392 | Not Available |
| hypothetical protein | ALO56_200103 | Q87YF6 | Positive | 3375540 - 3375674 | 4820.83 |
| ribosomal rna large subunit methyltransferase j | ALO56_00816 | P31777 | Negative | 3376017 - 3376853 | 31730.4 |
| uncharacterized protein | ALO56_00817 | Not Available | Positive | 3377236 - 3377466 | 8270.98 |
| uncharacterized protein | ALO56_00818 | Not Available | Positive | 3377573 - 3377833 | 9242.18 |
| uncharacterized protein | ALO56_00819 | Not Available | Negative | 3378009 - 3378311 | 10874.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









