Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | ALO56_02685 | Not Available | Positive | 3343391 - 3344815 | 50506.4 |
| dna mismatch repair protein mutl | ALO56_02686 | Q87VJ2 | Positive | 3344812 - 3346776 | 72064.9 |
| trna dimethylallyltransferase | ALO56_02687 | Q48P03 | Positive | 3346777 - 3347748 | 35629.9 |
| rna-binding protein hfq | ALO56_02688 | Q48P02 | Positive | 3347840 - 3348100 | 9354.31 |
| gtpase hflx | ALO56_02689 | P25519 | Positive | 3348113 - 3349414 | 48802.4 |
| hflk protein | ALO56_02690 | P40605 | Positive | 3349487 - 3350689 | 44286.8 |
| protein hflc | ALO56_02691 | P44545 | Positive | 3350689 - 3351558 | 33020.4 |
| atp phosphoribosyltransferase regulatory subunit | ALO56_04908 | Q87VJ8 | Positive | 3351843 - 3353030 | 42827.3 |
| adenylosuccinate synthetase | ALO56_02693 | Q4ZYX5 | Positive | 3353085 - 3354377 | 47073.6 |
| methyl-accepting chemotaxis protein | ALO56_02694 | Q9I0I4 | Positive | 3354621 - 3356555 | 68092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









