Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | ALO56_02415 | Q32HT7 | Negative | 271129 - 271464 | 12117.8 |
| dsrh family protein | ALO56_02416 | Not Available | Negative | 271461 - 271757 | 10662.7 |
| sulfur relay protein tusc | ALO56_02417 | Q9I0N2 | Negative | 271757 - 272119 | 12819.5 |
| sulfur transfer complex subunit tusd | ALO56_02418 | Q9I0N3 | Negative | 272121 - 272531 | 14909.7 |
| dead/deah box helicase | ALO56_101224 | P50830 | Negative | 272656 - 274911 | 82937.5 |
| putative atp /gtp binding protein | ALO56_100269 | Not Available | Negative | 274883 - 276178 | 47681.1 |
| Trna-ser | Not Available | Not Available | Positive | 278787 - 278874 | Not Available |
| uncharacterized protein | ALO56_02419 | Q03268 | Positive | 278960 - 279667 | 25626.9 |
| serralysin | ALO56_02420 | A0A0C5CJR8 | Positive | 280164 - 281603 | 49893.7 |
| protease inhibitor inh | ALO56_02421 | Q87ZU3 | Positive | 281640 - 282050 | 14738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









