Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | ALO56_02675 | Q9HUK9 | Negative | 3333269 - 3334084 | 29816.4 |
| uncharacterized protein | ALO56_02676 | Not Available | Negative | 3334130 - 3335665 | 57174.6 |
| flagellar motor protein mota | ALO56_02677 | P55891 | Positive | 3335873 - 3336724 | 30411.6 |
| flagellar motor protein motb | ALO56_02678 | P55892 | Positive | 3336728 - 3337750 | 36855.6 |
| putative ribosome bioproteinsis gtpase rsga | ALO56_02679 | Q87VI5 | Negative | 3337829 - 3338860 | 37451.9 |
| oligoribonuclease | ALO56_02680 | Q87VI6 | Positive | 3338969 - 3339502 | 20507.4 |
| uncharacterized protein | ALO56_02681 | P0AGM3 | Positive | 3339615 - 3340226 | 22268.2 |
| epoxyqueuosine reductase | ALO56_04905 | Q9HUL4 | Negative | 3340282 - 3341370 | 40625.6 |
| uncharacterized protein | ALO56_04907 | Q83CM5 | Positive | 3341428 - 3342918 | 51077.7 |
| uncharacterized protein | ALO56_02684 | P0AF68 | Positive | 3342906 - 3343376 | 17005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









