Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02665 | P0A8Z9 | Positive | 3320107 - 3320724 | 22321.8 |
| dna topoisomerase 4 subunit b | ALO56_02666 | Q9HUJ8 | Positive | 3320798 - 3322702 | 69495.0 |
| uncharacterized protein | ALO56_02667 | Not Available | Positive | 3322699 - 3323676 | 35726.5 |
| transporter | ALO56_02668 | Not Available | Positive | 3323673 - 3324194 | 18603.4 |
| dna topoisomerase 4 subunit a | ALO56_02669 | Q9HUK1 | Positive | 3324205 - 3326460 | 82979.8 |
| lipoprotein | ALO56_02670 | Not Available | Positive | 3326641 - 3327339 | 25406.8 |
| hamp domain-containing protein | ALO56_02671 | Not Available | Negative | 3327425 - 3328981 | 57031.6 |
| phosphoserine phosphatase serb | ALO56_02672 | O53289 | Positive | 3329112 - 3330326 | 43773.8 |
| uncharacterized protein | ALO56_04904 | Q9HUK7 | Negative | 3330369 - 3332234 | 69518.2 |
| phosphatidylserine decarboxylase proenzyme | ALO56_02674 | C3KDM6 | Negative | 3332337 - 3333209 | 32000.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









