Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine/purine uracil thiamine allantoin permease | ALO56_02657 | Not Available | Positive | 3313054 - 3314343 | 45231.4 |
| putative lipoprotein | ALO56_100201 | Not Available | Negative | 3314312 - 3315079 | 28268.2 |
| adp-ribose pyrophosphatase nudf | ALO56_02658 | P83843 | Positive | 3315267 - 3315884 | 23030.3 |
| uncharacterized protein | ALO56_02659 | Not Available | Positive | 3315875 - 3316327 | 17270.9 |
| hypothetical protein | ALO56_02660 | Not Available | Positive | 3316580 - 3317215 | 23985.1 |
| uncharacterized protein | ALO56_02661 | Not Available | Positive | 3317409 - 3317687 | 10798.7 |
| uncharacterized protein | ALO56_02662 | Not Available | Positive | 3318156 - 3318359 | 7447.05 |
| hypothetical protein | ALO56_101282 | Not Available | Positive | 3318680 - 3318862 | 6618.9 |
| uncharacterized protein | ALO56_02663 | Not Available | Positive | 3318907 - 3319119 | 7485.52 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO56_02664 | D4P095 | Positive | 3319212 - 3320018 | 29154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









