Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | ALO56_02628 | Q48JS1 | Negative | 3288229 - 3288423 | 7368.38 |
| translation initiation factor if-3 | ALO56_02629 | P0A132 | Negative | 3288484 - 3289017 | 20052.5 |
| threonine--trna ligase | ALO56_04897 | Q48JS3 | Negative | 3289035 - 3290990 | 73620.0 |
| uncharacterized protein | ALO56_02631 | Not Available | Positive | 3291305 - 3291613 | 10662.7 |
| cold shock protein capa | ALO56_02632 | P72188 | Positive | 3291907 - 3292119 | 7657.0 |
| lipoprotein | ALO56_02633 | Not Available | Negative | 3292185 - 3292520 | 11702.9 |
| uncharacterized protein | ALO56_02634 | Not Available | Positive | 3292833 - 3293027 | 6977.39 |
| inosine/uridine-preferring nucleoside hydrolase | ALO56_02635 | Q9P6J4 | Negative | 3293050 - 3294075 | 36687.4 |
| d-ribose pyranase | ALO56_02636 | Q48JS8 | Negative | 3294116 - 3294520 | 14543.0 |
| phosphofructokinase | ALO56_02637 | P0A9J7 | Negative | 3294517 - 3295437 | 31422.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









