Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ured | ALO56_02620 | Q883F5 | Positive | 3280166 - 3281023 | 30675.3 |
| lipoprotein | ALO56_02621 | Not Available | Positive | 3281212 - 3281673 | 16346.8 |
| uncharacterized protein | ALO56_02622 | Not Available | Negative | 3281814 - 3282509 | 24815.8 |
| uncharacterized protein | ALO56_02623 | Not Available | Negative | 3283024 - 3283281 | 9523.79 |
| Trna-pro | Not Available | Not Available | Positive | 3283503 - 3283579 | Not Available |
| putative transcriptional regulator | ALO56_100126 | Not Available | Negative | 3283668 - 3284024 | 13964.0 |
| integration host factor subunit alpha | ALO56_02624 | Q48JR7 | Negative | 3284005 - 3284307 | 11476.8 |
| phenylalanine--trna ligase beta subunit | ALO56_04896 | Q883H7 | Negative | 3284311 - 3286707 | 87190.8 |
| phenylalanine--trna ligase alpha subunit | ALO56_02626 | Q48JR9 | Negative | 3286722 - 3287738 | 38185.0 |
| 50s ribosomal protein l20 | ALO56_02627 | Q48JS0 | Negative | 3287843 - 3288199 | 13314.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









