Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02601 | Not Available | Positive | 3260053 - 3260439 | 14450.3 |
| 6-aminohexanoate-cyclic-dimer hydrolase | ALO56_02602 | P13397 | Negative | 3260459 - 3261910 | 51419.4 |
| uncharacterized protein | ALO56_02603 | Not Available | Negative | 3261972 - 3262913 | 34496.7 |
| arac family transcriptional regulator | ALO56_02604 | P36547 | Negative | 3262982 - 3263953 | 36421.4 |
| arac family transcriptional regulator | ALO56_02605 | Q8G9F9 | Negative | 3264069 - 3265079 | 36562.5 |
| aliphatic isothiocyanate resistance protein saxa | ALO56_100575 | P96655 | Positive | 3265144 - 3266094 | 34291.0 |
| isothiocyanate resistance protein saxb | ALO56_02606 | P96654 | Positive | 3266176 - 3266721 | 19119.0 |
| amidase | ALO56_04894 | P22984 | Negative | 3267005 - 3268555 | 54532.0 |
| transcription antitermination protein | ALO56_02608 | Not Available | Negative | 3268725 - 3269357 | 23418.7 |
| regulatory protein | ALO56_02609 | P27017 | Negative | 3269354 - 3270502 | 42694.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









