Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine-trna-protein transferase | ALO56_100002 | Q87ZS3 | Negative | 259549 - 260259 | 27977.6 |
| leucyl/phenylalanyl-trna--protein transferase | ALO56_100312 | Q4ZRL0 | Negative | 260306 - 260995 | 26117.1 |
| cell division ftsk/spoiiie protein | ALO56_02408 | Q9Z3U1 | Positive | 261475 - 263877 | 87460.5 |
| outer-membrane lipoprotein carrier protein | ALO56_02409 | Q87ZS6 | Positive | 263947 - 264570 | 22861.5 |
| recombination factor protein rara | ALO56_02410 | P39918 | Positive | 264590 - 265912 | 48950.3 |
| putative fluoride ion transporter crcb | ALO56_02411 | Q48H73 | Positive | 265912 - 266286 | 13156.5 |
| serine--trna ligase | ALO56_02412 | Q4ZRL5 | Positive | 266303 - 267583 | 47194.3 |
| siroheme synthase | ALO56_02413 | Q48H75 | Positive | 267584 - 268978 | 50219.8 |
| glutathione s-transferase domain-containing protein | ALO56_02414 | P42620 | Negative | 269024 - 270022 | 37966.4 |
| anthranilate phosphoribosyltransferase like | ALO56_100048 | Not Available | Negative | 270131 - 271132 | 37131.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









