Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200108 | Not Available | Negative | 3239574 - 3241055 | 52826.2 |
| hypothetical protein | ALO56_200092 | Q08623 | Positive | 3241385 - 3242074 | 25199.9 |
| uncharacterized protein | ALO56_02584 | Not Available | Positive | 3242336 - 3242752 | 15698.3 |
| gnat family acetyltransferase | ALO56_02585 | Q7PCJ8 | Positive | 3242821 - 3243303 | 18015.2 |
| hypothetical protein | ALO56_02586 | Not Available | Negative | 3243370 - 3243510 | 5290.2 |
| chemotaxis protein chew | ALO56_02587 | Not Available | Negative | 3243572 - 3245050 | 53177.3 |
| methyl-accepting chemotaxis protein | ALO56_100499 | Not Available | Negative | 3245047 - 3247209 | 80816.5 |
| uncharacterized protein | ALO56_02588 | Not Available | Positive | 3247946 - 3248122 | 5850.56 |
| glucose starvation-inducible protein b | ALO56_02589 | Not Available | Positive | 3248336 - 3248683 | 11616.8 |
| clp protease | ALO56_02590 | Not Available | Positive | 3248812 - 3249363 | 20181.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









