Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02312 | Q9VAM9 | Positive | 3215932 - 3216489 | 20510.3 |
| merr family transcriptional regulator | ALO56_02313 | P45277 | Negative | 3216518 - 3216964 | 16618.6 |
| cadmium-translocating p-type atpase | ALO56_02314 | P37386 | Positive | 3217049 - 3219286 | 78704.5 |
| formimidoylglutamase | ALO56_04852 | O31201 | Negative | 3219343 - 3220218 | 32757.9 |
| imidazolonepropionase | ALO56_100000 | Q4ZLW0 | Negative | 3220158 - 3221363 | 43336.8 |
| proline-specific permease proy | ALO56_02316 | P37460 | Negative | 3221380 - 3222756 | 49216.8 |
| histidine ammonia-lyase | ALO56_04853 | Q87UM1 | Negative | 3222860 - 3224410 | 54864.0 |
| histidine ammonia-lyase | ALO56_04854 | Q67JH4 | Negative | 3224502 - 3226049 | 55017.4 |
| histidine abc transporter, atp-binding protein | ALO56_02319 | E0SCY1 | Negative | 3226056 - 3226886 | 30840.6 |
| binding-protein dependent transport system inner membrane protein | ALO56_02320 | P14176 | Negative | 3226883 - 3227734 | 30788.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









