Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric siderophore abc transporter substrate-binding protein | ALO56_04850 | Not Available | Negative | 3193626 - 3193951 | 12040.9 |
| uncharacterized protein | ALO56_02296 | Not Available | Positive | 3194957 - 3195220 | 9428.43 |
| cysteine desulfurase | ALO56_02297 | O31269 | Negative | 3195286 - 3196446 | 40752.6 |
| asnc family transcriptional regulator | ALO56_02298 | Not Available | Positive | 3196774 - 3197244 | 17301.7 |
| had family hydrolase | ALO56_02299 | P77625 | Positive | 3197514 - 3198188 | 24659.5 |
| uncharacterized protein | ALO56_02300 | Not Available | Positive | 3198353 - 3198646 | 10958.8 |
| peptidase c1a, papain | ALO56_02301 | Q5UQE9 | Positive | 3199120 - 3199887 | 28685.3 |
| mannose-6-phosphate isomerase | ALO56_100629 | Not Available | Negative | 3201836 - 3202147 | 11511.6 |
| short chain dehydrogenase/reductase oxidoreductase | ALO56_02302 | Not Available | Positive | 3202289 - 3203059 | 27459.8 |
| uncharacterized protein | ALO56_02303 | U2ZU49 | Positive | 3203355 - 3204107 | 27399.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









