Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00143 | P0AD18 | Positive | 3184244 - 3184843 | 21698.8 |
| protein sprt | ALO56_00144 | Q4ZQ34 | Positive | 3184965 - 3185459 | 19330.2 |
| c4-dicarboxylate transport protein | ALO56_00145 | Q48FG6 | Negative | 3185526 - 3186878 | 47569.5 |
| hypothetical protein | ALO56_200116 | Not Available | Negative | 3187454 - 3187747 | 10223.9 |
| glycerol-3-phosphate acyltransferase | ALO56_05152 | Q48F46 | Positive | 3187816 - 3188524 | 26822.5 |
| uncharacterized protein | ALO56_01553 | Not Available | Negative | 3188643 - 3188873 | 9140.76 |
| hypothetical protein | ALO56_01554 | Not Available | Negative | 3189067 - 3189477 | 15599.3 |
| uncharacterized protein | ALO56_01555 | Not Available | Negative | 3189990 - 3191141 | 41588.3 |
| regulatory protein lysr | ALO56_01556 | P0DUU5 | Negative | 3191262 - 3192146 | 32349.6 |
| phenazine biosynthesis family protein | ALO56_04676 | Not Available | Positive | 3192807 - 3193625 | 28726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









