Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | ALO56_01712 | O34451 | Negative | 3176290 - 3177312 | 35005.0 |
| iron abc transporter substrate-binding protein | ALO56_01713 | Not Available | Negative | 3177309 - 3178322 | 37502.9 |
| gntr family transcriptional regulator | ALO56_01714 | P31460 | Negative | 3178674 - 3179390 | 26478.4 |
| gntr family transcriptional regulator | ALO56_04694 | P44487 | Positive | 3179442 - 3180233 | 29016.9 |
| thioredoxin | ALO56_00137 | Not Available | Negative | 3180520 - 3180987 | 16995.4 |
| arsenate reductase | ALO56_00138 | P76569 | Positive | 3181119 - 3181472 | 12805.6 |
| hypothetical protein | ALO56_00139 | Q9I509 | Positive | 3181469 - 3182074 | 21244.6 |
| uncharacterized protein | ALO56_00140 | Not Available | Positive | 3182067 - 3182483 | 15532.7 |
| dna-3-methyladenine glycosylase i | ALO56_00141 | Not Available | Positive | 3182522 - 3183193 | 25399.7 |
| trna 2-thiocytidine biosynthesis protein ttca | ALO56_04360 | Q4ZQ35 | Negative | 3183200 - 3184048 | 31980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









