Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family protein | ALO56_03313 | Not Available | Positive | 3164085 - 3166622 | 96113.3 |
| succinyl-diaminopimelate desuccinylase | ALO56_03314 | Q886Q4 | Positive | 3166722 - 3167873 | 41052.6 |
| uncharacterized protein | ALO56_03315 | Not Available | Positive | 3168703 - 3169080 | 14171.4 |
| na/pi cotransporter ii-like protein | ALO56_04424 | Q8X5Z7 | Negative | 3169195 - 3169471 | 9741.44 |
| terc family efflux transporter | ALO56_00441 | P43932 | Negative | 3169684 - 3170433 | 27506.5 |
| citrate transporter | ALO56_04425 | Not Available | Negative | 3170505 - 3171818 | 46649.4 |
| glutathione-dependent formaldehyde-activating protein | ALO56_00443 | Not Available | Positive | 3172135 - 3172536 | 14662.3 |
| acetyltransferase | ALO56_01709 | Not Available | Positive | 3172769 - 3173350 | 21874.1 |
| u32 family peptidase | ALO56_04693 | P76104 | Negative | 3173377 - 3175536 | 80017.5 |
| iron abc transporter atp-binding protein | ALO56_01711 | Q7NN36 | Negative | 3175502 - 3176293 | 28429.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









