Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b12-dependent methionine synthase | ALO56_04725 | O33465 | Positive | 3148705 - 3152514 | 139701.0 |
| 30s ribosomal protein s2 | ALO56_03304 | Q886P3 | Negative | 3152683 - 3153426 | 27222.1 |
| methionine aminopeptidase | ALO56_03305 | P0AE20 | Positive | 3153739 - 3154521 | 28658.6 |
| bifunctional uridylyltransferase/uridylyl-removing enzyme | ALO56_03306 | Q48F57 | Positive | 3154569 - 3157268 | 102846.0 |
| succinyldiaminopimelate transaminase | ALO56_03307 | O50434 | Positive | 3157301 - 3158494 | 43916.6 |
| uncharacterized protein | ALO56_03308 | Not Available | Positive | 3158618 - 3159454 | 31586.2 |
| uncharacterized protein | ALO56_03309 | P24178 | Positive | 3159963 - 3160310 | 13243.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ALO56_03310 | Q88MP1 | Positive | 3160358 - 3161392 | 36192.4 |
| cysteine sulfinate desulfinase | ALO56_03311 | Q9Z408 | Positive | 3161452 - 3162657 | 43233.6 |
| thif family protein | ALO56_03312 | Q46927 | Negative | 3163052 - 3163888 | 29913.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









