Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, merr | ALO56_01787 | Q8Z8S3 | Positive | 3135279 - 3135671 | 15023.2 |
| hydroxymethylglutaryl-coa lyase | ALO56_04721 | Q9I2A0 | Positive | 3135629 - 3136600 | 34110.6 |
| isovaleryl-coa dehydrogenase | ALO56_01789 | Q9FS87 | Positive | 3137314 - 3138477 | 42463.7 |
| 3-methylcrotonyl-coa carboxylase subunit beta | ALO56_01790 | Q3ULD5 | Positive | 3138491 - 3140098 | 57797.6 |
| gamma-carboxygeranoyl-coa hydratase | ALO56_01791 | Not Available | Positive | 3140107 - 3140547 | 16037.4 |
| acetyl-coa carboxylase, biotin carboxylase | ALO56_01792 | Q54KE6 | Positive | 3140879 - 3142855 | 71419.2 |
| methyl-accepting chemotaxis protein | ALO56_01793 | Q03003 | Negative | 3142942 - 3144246 | 49127.9 |
| fe/s bioproteinsis protein nfua | ALO56_01794 | Q4ZTL7 | Negative | 3144428 - 3145075 | 23561.0 |
| acyltransferase 3 | ALO56_01795 | P26502 | Negative | 3145122 - 3146144 | 38400.0 |
| esterified fatty acid cis/trans isomerase | ALO56_04722 | Not Available | Negative | 3146335 - 3148686 | 87826.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









