Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | ALO56_01777 | Not Available | Negative | 3120865 - 3122166 | 46320.3 |
| putative thiol peroxidase | ALO56_01778 | P57668 | Negative | 3122331 - 3122831 | 17381.6 |
| regulatory protein lysr | ALO56_01779 | Not Available | Negative | 3122924 - 3123841 | 34235.5 |
| uncharacterized protein | ALO56_04718 | E1WAU5 | Negative | 3123955 - 3127644 | 131752.0 |
| surface antigen | ALO56_04719 | D2TN56 | Negative | 3127641 - 3129419 | 65116.2 |
| uncharacterized protein | ALO56_01782 | Not Available | Negative | 3129427 - 3130098 | 25413.4 |
| exonuclease iii | ALO56_01783 | P09030 | Positive | 3130290 - 3131102 | 31015.7 |
| ompa family protein | ALO56_01784 | Not Available | Positive | 3131230 - 3132576 | 48526.3 |
| acyl-coa dehydrogenase | ALO56_01785 | Not Available | Negative | 3132784 - 3134013 | 45371.0 |
| regulatory protein lysr | ALO56_01786 | Not Available | Positive | 3134184 - 3135131 | 35624.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









