Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter | ALO56_01769 | Not Available | Positive | 3098512 - 3101151 | 91633.0 |
| 1,4-alpha-glucan branching enzyme glgb | ALO56_01770 | Q881X0 | Negative | 3101309 - 3103540 | 84261.9 |
| trehalose synthase/ maltokinase | ALO56_04711 | A0R6E0 | Negative | 3103537 - 3106863 | 125361.0 |
| alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase | ALO56_100524 | Q9I1W4 | Negative | 3106882 - 3108903 | 76626.5 |
| transporter membrane protein | ALO56_01772 | Q55026 | Negative | 3109416 - 3109946 | 18502.7 |
| short-chain dehydrogenase | ALO56_01773 | P52037 | Negative | 3110006 - 3110752 | 26101.4 |
| diguanylate cye/phosphodiesterase | ALO56_01774 | Not Available | Negative | 3110857 - 3112968 | 75784.4 |
| rnd efflux system, outer membrane lipoprotein, nodt | ALO56_04712 | Not Available | Negative | 3113182 - 3115047 | 67283.9 |
| acriflavin resistance protein | ALO56_04713 | A1JKW9 | Negative | 3114654 - 3117761 | 112621.0 |
| multidrug rnd efflux transporter, permease mdtb | ALO56_01776 | D0JNB0 | Negative | 3117758 - 3120868 | 111962.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









