Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01749 | Not Available | Negative | 3079083 - 3080288 | 43399.1 |
| iclr family transcriptional regulator | ALO56_01750 | Not Available | Negative | 3080313 - 3081095 | 29201.8 |
| endoribonuclease l-psp | ALO56_01751 | Q10121 | Negative | 3081152 - 3081538 | 14156.9 |
| amino acid abc transporter atp-binding protein | ALO56_01752 | P39456 | Negative | 3081561 - 3082352 | 29323.9 |
| amino acid abc transporter permease | ALO56_01753 | Not Available | Negative | 3082349 - 3083011 | 24333.4 |
| amino acid abc transporter permease | ALO56_01754 | P0AEQ8 | Negative | 3083021 - 3083683 | 24360.6 |
| amino acid abc transporter substrate-binding protein | ALO56_01755 | P45766 | Negative | 3083749 - 3084603 | 30966.9 |
| uncharacterized protein | ALO56_01756 | Not Available | Negative | 3084936 - 3085283 | 11801.1 |
| uncharacterized protein | ALO56_01757 | Not Available | Negative | 3085332 - 3085775 | 17182.0 |
| uncharacterized protein | ALO56_01758 | Not Available | Negative | 3085901 - 3086326 | 15541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









