Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03762 | Not Available | Positive | 3067661 - 3068374 | 26342.4 |
| trm22 transposase | ALO56_03763 | P55729 | Negative | 3068671 - 3069831 | 44463.7 |
| uncharacterized protein | ALO56_01741 | Not Available | Negative | 3070024 - 3070710 | 25106.1 |
| abc transporter substrate-binding protein | ALO56_01742 | Not Available | Positive | 3071197 - 3072207 | 36635.8 |
| binding-protein dependent transport system inner membrane protein | ALO56_01743 | P40401 | Positive | 3072204 - 3073049 | 30349.8 |
| aliphatic sulfonates import atp-binding protein ssub | ALO56_01744 | Q4ZTG9 | Positive | 3073053 - 3073766 | 26153.9 |
| putrescine-binding periplasmic protein | ALO56_01745 | Q9I6J0 | Negative | 3073783 - 3074862 | 39415.2 |
| uncharacterized protein | ALO56_01746 | Not Available | Positive | 3075207 - 3075479 | 9811.92 |
| uvrd/rep helicase | ALO56_04704 | Not Available | Negative | 3075505 - 3078066 | 96098.2 |
| carbohydrate kinase pfkb | ALO56_01748 | P45416 | Negative | 3078133 - 3079053 | 33514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









