Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin adenolsyltransferase/cobinamide atp-dependent adenolsyltransferase | ALO56_03752 | Q9I472 | Negative | 3057603 - 3058214 | 22487.2 |
| l-sorbosone dehydrogenase | ALO56_03753 | Not Available | Positive | 3058684 - 3060012 | 47220.8 |
| lipoprotein | ALO56_03754 | P76190 | Negative | 3060287 - 3060829 | 19160.1 |
| nlp/p60-like protein family protein | ALO56_03755 | P0AFV6 | Negative | 3060924 - 3061646 | 26104.2 |
| nad-dependent deacetylase | ALO56_03756 | Q885X7 | Negative | 3061722 - 3062486 | 27602.4 |
| dna replication initiation factor | ALO56_03757 | O86235 | Negative | 3062480 - 3063184 | 26664.4 |
| permease | ALO56_03758 | Q9ZCT3 | Negative | 3063401 - 3064474 | 38588.1 |
| uncharacterized protein | ALO56_03759 | Not Available | Negative | 3064514 - 3065587 | 38051.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | ALO56_03760 | Q885Y1 | Positive | 3065944 - 3067002 | 37056.9 |
| phosphoribosylglycinamide formyltransferase | ALO56_03761 | P08179 | Positive | 3067002 - 3067652 | 23614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









