Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | ALO56_03742 | Not Available | Negative | 3048089 - 3049297 | 42410.1 |
| cobalamin synthase | ALO56_03743 | Q48FK1 | Negative | 3049402 - 3050133 | 25686.6 |
| alpha-ribazole-5'-phosphate phosphatase | ALO56_03744 | P52086 | Negative | 3050135 - 3050707 | 20862.9 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | ALO56_03745 | Q48FJ9 | Negative | 3050704 - 3051756 | 36200.7 |
| adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | ALO56_03746 | Q9I466 | Negative | 3051753 - 3052274 | 18871.1 |
| cobyric acid synthase | ALO56_03747 | Q885W8 | Negative | 3052276 - 3053736 | 52350.1 |
| threonine-phosphate decarboxylase | ALO56_03748 | Q9I468 | Negative | 3053736 - 3054737 | 37023.4 |
| cobalamin biosynthesis protein cobd | ALO56_03749 | A4VJ38 | Negative | 3054730 - 3055638 | 32889.7 |
| nitroreductase family protein | ALO56_03750 | Q92PC8 | Negative | 3055635 - 3056285 | 24159.3 |
| cobyrinic acid a,c-diamide synthase | ALO56_03751 | A4VJ35 | Negative | 3056282 - 3057577 | 46242.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









