Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | ALO56_100252 | P0AA74 | Negative | 3039183 - 3040142 | 34603.0 |
| uncharacterized protein | ALO56_05116 | Not Available | Negative | 3040257 - 3040955 | 25337.9 |
| uncharacterized protein | ALO56_03734 | Not Available | Positive | 3041067 - 3041387 | 12338.7 |
| uncharacterized protein | ALO56_03735 | Not Available | Negative | 3041471 - 3041593 | 4748.83 |
| uncharacterized protein | ALO56_03736 | Q9I4U3 | Negative | 3041769 - 3043247 | 55637.0 |
| uncharacterized protein | ALO56_03737 | Not Available | Positive | 3043917 - 3044222 | 10772.6 |
| uncharacterized protein | ALO56_03738 | Not Available | Positive | 3044680 - 3044928 | 9272.17 |
| uncharacterized protein | ALO56_03739 | Not Available | Positive | 3045206 - 3045685 | 17762.6 |
| aromatic hydrocarbon degradation protein | ALO56_03740 | Q9K1M2 | Positive | 3045836 - 3047119 | 45703.2 |
| glutathione peroxidase | ALO56_03741 | O08368 | Negative | 3047357 - 3047911 | 20270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









