Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cye | ALO56_03724 | Q9HT84 | Positive | 3028233 - 3029159 | 34530.6 |
| uncharacterized protein | ALO56_05115 | Not Available | Negative | 3029194 - 3029979 | 29964.7 |
| sensory box/ggdef domain/eal domain-containing protein | ALO56_03726 | Q8EJM6 | Negative | 3030010 - 3032472 | 91049.5 |
| abc transporter, atp-binding/permease protein | ALO56_100067 | P45861 | Negative | 3032595 - 3034421 | 66804.0 |
| thioredoxin | ALO56_03727 | Not Available | Negative | 3034414 - 3035046 | 22988.2 |
| hypothetical protein | ALO56_03728 | Q885U7 | Negative | 3035050 - 3036000 | 35686.1 |
| bola protein | ALO56_03729 | Q56585 | Negative | 3036172 - 3036465 | 10688.7 |
| uncharacterized protein | ALO56_03730 | Not Available | Negative | 3036478 - 3037005 | 18807.9 |
| fumarate hydratase s ii | ALO56_03731 | Q885V0 | Positive | 3037175 - 3038569 | 49124.9 |
| hypothetical protein | ALO56_03732 | Not Available | Positive | 3038562 - 3039176 | 23086.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









