Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | ALO56_03714 | Q885T2 | Negative | 3015316 - 3016005 | 24668.5 |
| prephenate dehydrogenase | ALO56_03715 | Q608S5 | Negative | 3016002 - 3017639 | 57578.4 |
| chorismate mutase | ALO56_05113 | Q9HZ67 | Negative | 3017682 - 3018779 | 40443.7 |
| phosphoserine aminotransferase | ALO56_03717 | Q4ZQ94 | Negative | 3018776 - 3019867 | 40009.7 |
| dna gyrase subunit a | ALO56_05114 | P48372 | Negative | 3020072 - 3022933 | 105379.0 |
| methylthioribose-1-phosphate isomerase | ALO56_03719 | Q885T7 | Negative | 3023163 - 3024275 | 40327.5 |
| n-ethylammeline chlorohydrolase | ALO56_03720 | Q21IS0 | Positive | 3024358 - 3025710 | 48902.6 |
| ubiquinone biosynthesis o-methyltransferase | ALO56_03721 | Q885T9 | Positive | 3025793 - 3026491 | 25933.2 |
| phosphoglycolate phosphatase | ALO56_03722 | Q88M11 | Positive | 3026495 - 3027166 | 24565.6 |
| oxoacyl- reductase | ALO56_03723 | P31808 | Positive | 3027194 - 3027934 | 26415.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









