Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03705 | Not Available | Positive | 3002710 - 3003192 | 17843.1 |
| uncharacterized protein | ALO56_03706 | Not Available | Positive | 3003308 - 3003514 | 7952.42 |
| threonine/serine transporter | ALO56_05112 | P0AAD7 | Negative | 3003758 - 3005095 | 48518.7 |
| tetr family transcriptional regulator | ALO56_03708 | Not Available | Positive | 3005352 - 3005972 | 22847.4 |
| competence protein comea | ALO56_03709 | Q57134 | Negative | 3006025 - 3006357 | 11758.0 |
| polysaccharide biosynthesis protein capd | ALO56_03710 | P39853 | Negative | 3006517 - 3008514 | 73765.6 |
| glycoside hydrolase family protein | ALO56_03711 | O34753 | Negative | 3008610 - 3009626 | 36104.0 |
| uncharacterized protein | ALO56_03712 | Not Available | Negative | 3012640 - 3012891 | 9282.92 |
| integration host factor subunit beta | ALO56_100012 | C3K6K2 | Negative | 3012915 - 3013211 | 11042.3 |
| 30s ribosomal protein s1 | ALO56_03713 | Q9HZ71 | Negative | 3013508 - 3015193 | 61988.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









